Transcript Gh_A01G020900.1
Exon-Intron Structure
| No. 5' UTR | No. CDS | No. 3' UTR | No. Exon | No. Intron |
|---|---|---|---|---|
| 1 | 6 | 1 | 6 | 5 |
| ID | Type | Chromosome | Start | End | Strand | Phase | Length | Sequence |
|---|---|---|---|---|---|---|---|---|
| 5' upstream sequence | ..........atccccaccaactcattatatatataatttctgggttcaaccgtttcttg | |||||||
| Gh_A01G020900.1:UTR5:1 | UTR5 | A01 | 1,848,086 | 1,848,153 | - | . | 68 | TTGTTTGTAGTTTTGGTTTTAATCTTTGAAGGAAGCAAAAAAGAAGGGAAAAAAAAAAGT TTGAATTA |
| Gh_A01G020900.1:CDS:1 | CDS | A01 | 1,847,630 | 1,848,085 | - | 0 | 456 | ATGCTAGCTGTGTCACCTTTGAGGAACAACACAAGCACAGATGATGACGAAGGAGAGATG GAGAGTACTTTCACAGTCAGCTCCGACGAGTTCCCGGATTTCGCTGACGGGAACTTACTT GAAAGTATCGATTTCGACGATCTTTTTCTCAGCATCGGTGTTGATGGCGACGTGTTACCT GATTTGGAGATGGACCCCGAAATTTTGGTTGAATTGCCCCCCGCCGGCGAGGAATCGGAG ATGAATGCGTCGGGAGAAAAAATCGAGGAAAGTGATAATCAGAGGAAAGATGAAGAAGAA AATAAGGTTTCGACGAGTAAAGGCGATGAGGAAACCGTCAGTAAAAGTGAGGAGACTAAA GCAGTTAAAACAGGCTCTAAAGATGGTGATAAGGGAAGAAAATCGTCAATAAAAGGAAAG AGTAACAACAACAATCAAGGCACTCGAAAACTGAAG |
| Gh_A01G020900.1:intron:1 | intron | A01 | 1,847,474 | 1,847,629 | - | 0 | 156 | gtaactgatactcggattttagggt..........ttctcttattttgaattgtttgaag |
| Gh_A01G020900.1:CDS:2 | CDS | A01 | 1,847,333 | 1,847,473 | - | 0 | 141 | GTGGATTGGACGCCGGAGCTTCACCGAAGGTTTGTACAAGCGGTGGAGCAGCTCGGGGTG GATAAGGCGGTGCCGTCGAGAATTTTAGAGCTTATGGGAATTGATTGTCTCACTCGCCAT AACATCGCCAGCCATCTTCAA |
| Gh_A01G020900.1:intron:2 | intron | A01 | 1,847,199 | 1,847,332 | - | 0 | 134 | gtaaatataattataaccattaatt..........gttataattatgttttgtggtgcag |
| Gh_A01G020900.1:CDS:3 | CDS | A01 | 1,846,854 | 1,847,198 | - | 0 | 345 | AAATATAGATCTCATAGGAAGCATTTACTAGCTCGTGAAGCGGAGGCGGCAAGTTGGATA CACAGACGGCAAATATACGGCGGCGCTACGCCGGTTGGTGGAGGAGGGAAGCGAGATGTG AACCATTGGCTTCCACCCACAATGGGTTTCCCGCCATCGGCTTCACCCATGCACCACCAG AACCACCATTTTAGGCCATTGCATGTATGGGGTCATCCCACTATGGATCAGTCTATAATG CACTTATGGCCAAAACACTTAGCACCCCCTCCGCCACCACCACGGCCAGCTTGGGGACCT ACACCACCGGCAGACCCTAGCTTTTGGCACCATCAGCACCACCGT |
| Gh_A01G020900.1:intron:3 | intron | A01 | 1,846,770 | 1,846,853 | - | 0 | 84 | gtatgctcttgtcacccttttcttt..........tgtttttttttttttggtttattag |
| Gh_A01G020900.1:CDS:4 | CDS | A01 | 1,846,707 | 1,846,769 | - | 0 | 63 | GTACCAAATGGACAAACCCCGGGAACACCGTGCTTTCCCCCGCCATTGACGGCGGCACCA ACG |
| Gh_A01G020900.1:intron:4 | intron | A01 | 1,846,591 | 1,846,706 | - | 0 | 116 | gtaaaccgttcactcattactgttt..........atttggtgctataatttacatgcag |
| Gh_A01G020900.1:CDS:5 | CDS | A01 | 1,846,471 | 1,846,590 | - | 0 | 120 | AGATTTGGTGTAGTACCGGTGCCGGGCATTCCTCCTCACCATGCAATGTACAAAGCTGAC ACCGGCATCGGTGTCCCTGCCAGCCAATTACGTCGCCACCCTCTCGTCGACTTACATCCG |
| Gh_A01G020900.1:intron:5 | intron | A01 | 1,846,185 | 1,846,470 | - | 0 | 286 | gttagtagcttatactttgttatca..........tatatctacaaattatgtgacacag |
| Gh_A01G020900.1:CDS:6 | CDS | A01 | 1,846,035 | 1,846,184 | - | 0 | 150 | TCGAAAGAGAGCATCGATGCCGCTATCGGGGACGTTTTATCGAAACCGTGGCTGCCGCTT CCTATCGGGCTGAAACCGCCATCAACGGATGGTGTTTTGGTGGAGCTACAACGTCAAGGA GTCCCAAAGATTCCACCTTCTTGTGCTTGA |
| Gh_A01G020900.1:UTR3:1 | UTR3 | A01 | 1,845,772 | 1,846,034 | - | . | 263 | ACCGCTTCCGGCCCACAGCGGCGAAAACTGTTAAATCCGACGACATATCTCGACGTTAAA TTCGTGTAGAAATCAAATCCTTCAAAAGGGTTTTTTTTTTCCGACTAGAGTTGCAGAGCA ACTTGGTTGTTGTTTTTGTTCCAGTGCGAGGACAGGTTTATTAATTAAGGTTGCCTAATC GATCCACTGTCTTGTAATGAAAAACCAGTTTTTTTTTGTAATGGTTTTAATGAATTGAGA TAATTTATTTGGATTTATGTTTT |
| 3' downstream sequence | gataatgaaattgttgggtcattgtcaataaaatagtgacttaacatttc.......... | |||||||